Physical map - assisted improvement of the oil palm genome assembly to enhance productivity


Citation

UNSPECIFIED (2011) Physical map - assisted improvement of the oil palm genome assembly to enhance productivity. [Proceedings Paper]

Abstract

In 2009 MPOB had announced the sequencing of three genomes from both species of oil palm. The oil palm genome assembly was improved using bacterial artificial chromosome SAC libraries. The SAC contigs were merged with sequence scaffolds to provide a genome wide physical map of oil palm. Highquality annotation was also generated. The oil palm genetic map was also aligned/integrated with the physical map and efforts made to identify the shell and fruit colour gene using the assembly information will also be discussed.


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Abstract

In 2009 MPOB had announced the sequencing of three genomes from both species of oil palm. The oil palm genome assembly was improved using bacterial artificial chromosome SAC libraries. The SAC contigs were merged with sequence scaffolds to provide a genome wide physical map of oil palm. Highquality annotation was also generated. The oil palm genetic map was also aligned/integrated with the physical map and efforts made to identify the shell and fruit colour gene using the assembly information will also be discussed.

Additional Metadata

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Item Type: Proceedings Paper
Additional Information: Available at Perpustakaan Sultan Abdul Samad Universiti Putra Malaysia 43400 UPM Serdang Selangor Malaysia. TP684 P3I61 2011 Call Number.
AGROVOC Term: Oil palm
AGROVOC Term: Genomes
AGROVOC Term: Mapping
AGROVOC Term: Molecular genetics
AGROVOC Term: Molecular biology
AGROVOC Term: analysis
AGROVOC Term: Productivity
AGROVOC Term: Genetic variation
Geographical Term: MALAYSIA
Depositing User: Ms. Suzila Mohamad Kasim
Last Modified: 24 Apr 2025 05:16
URI: http://webagris.upm.edu.my/id/eprint/13853

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